What is Bacterial Taxa Relative Abundance (Phylum, Family, Genus, Species)?
Next-generation sequencing of the 16S rRNA gene or shotgun metagenomics quantifies the relative abundance of bacterial phyla (Firmicutes, Bacteroidetes, Actinobacteria, Proteobacteria), families, genera, and sometimes species in stool. The profile reflects colonic microbial community structure, which is influenced by diet, antibiotics, host genetics, and disease.